Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEILIAGGSGFLGKQIIKAALTKG-HKVAYLSRHEGKGDI-FKDPRLTYIRGDITEADK-IHLEDRTFDILIDCIGAIKPN-----Q--LDELNVKATQKAVALCHKNQIPKLVYISANSG-----------------------Y-SAYIKSKRKAEQIIKA----SGLDYLFVRPGLMYGEE-RPLS-------IFQAKCIK-LFSHLP--FLGIVVQKVFPTKVVIVAEAIVTTLRKKP---TQKILSIEELNNK
2BLL Chain:A ((316-565))
MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKY-RKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINI------
General information:
TITO was launched using:
RESULT:
Template:
2BLL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -101715 for 1440 contacts (-70.6/contact) +
2D Compatibility (PS) -21549 + (NN) -13007 + (LL) 408
1D Compatibility (HY) -14400 + (ID) 2150
Total energy: -152413.0 ( -105.84 by residue)
QMean score : 0.540
(partial model without unconserved sides chains):
PDB file :
Tito_2BLL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2BLL-query.scw
PDB file :
Tito_Scwrl_2BLL.pdb
: