Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDPSTIEKLAKNKQKP
2FV8 Chain:A ((23-153))
MIRKKLVVVGDGACGKTCLLIVFSKDEFP-------FENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKDLRSDEHVRTELAR-----
General information:
TITO was launched using:
RESULT:
Template:
2FV8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -72904 for 864 contacts (-84.4/contact) +
2D Compatibility (PS) -13221 + (NN) -5312 + (LL) 492
1D Compatibility (HY) -14800 + (ID) 3600
Total energy: -109345.0 ( -126.56 by residue)
QMean score : 0.468
(partial model without unconserved sides chains):
PDB file :
Tito_2FV8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FV8-query.scw
PDB file :
Tito_Scwrl_2FV8.pdb
: