Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDSKHQCVKLNDGHFMPVLGFGTYAPPEVPRSKALEVTKLAIEAGFRHIDSAHLYNNEEQVGLAIRSKIADGSVKREDIFYTSKLWSTFHRPELVRPALENSLKKAQLDYVDLYLIHSPMSLKPGEELSPTDENGKVIFDIVDLCTTWEAMEKCKDAGLAKSIGVSNFNRRQLEMILNKPGLKYKPVCNQVECHPYFNRSKLLDFCKSKDIVLVAYSALGSQRDKRWVDPNSPVLLEDPVLCALAKKHKRTPALIALRYQLQRGVVVLAKSYNEQRIRQNVQVFEFQLTAEDMKAIDGLDRNLHYFNSDSFASHPN-YPYSDEY |
3H7U Chain:A ((26-325)) | -----TFFKLNTGAKFPSVGLGTWQA---SPGLVGDAVAAAVKIGYRHIDCAQIYGNEKEIGAVLKKLFEDRVVKREDLFITSKLWCTDHDPQDVPEALNRTLKDLQLEYVDLYLIHWPARIKKGS--VGIKP-ENL-L-PVDIPSTWKAMEALYDSGKARAIGVSNFSTKKLADLLELAR--VPPAVNQVECHPSWRQTKLQEFCKSKGVHLSAYSPLGSP-GTTWLK---SDVLKNPILNMVAEKLGKSPAQVALRWGLQMGHSVLPKSTNEGRIKENFNVFDWSIPDYMFAKFAEIEQA-RLVTGSFL-VHETLSPYK--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3H7U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -166364 for 2533 contacts (-65.7/contact) +
2D Compatibility (PS) -32843 + (NN) -23045 + (LL) 1228
1D Compatibility (HY) -23200 + (ID) 6000
Total energy: -250224.0 ( -98.79 by residue)
QMean score : 0.685
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