Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNKPITPSTYVRCLNVGLIRKLSDFIDPQEGWKKLAVAIKKPSGDDRYNQFHIRRFEALLQTGKSPTSELLFDWGTTNCTVGDLVDLLIQNEFFAPASLLLPDAVPKTANTLPSKEAITVQQKQMPFCDKDRTLMTPVQNLEQSYMPPDSSSPENKSLEVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTT-VAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTAS |
4AGW Chain:B ((25-275)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPE----AFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADF--------------------PIKWTAPEAALYGRFTIKSDVWSFGILLTELTT------KGRVPYPGMVNREVLDQVERGYR-------MPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTS |
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General information:
TITO was launched using:
| RESULT:
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Template: 4AGW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -91538 for 1911 contacts (-47.9/contact) +
2D Compatibility (PS) -24264 + (NN) -7843 + (LL) 12476
1D Compatibility (HY) -18400 + (ID) 4000
Total energy: -133569.0 ( -69.89 by residue)
QMean score : 0.378
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