Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDGETAEEQGGPVPPPVAPGGPGLGGAPGGRREPKKYAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLL-------YDSPKARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQ-SMVVP--------QTPLHTARVLQEDKDHWDEVKEEMTSALATMRVDYDQVK-----IKDLKTSNNRLLNKRRKKQAGSSSASQGCNNQ |
| 3IGO Chain:A ((29-350)) | ------------------------------------------------MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNK-TSTILREVEL-LKKLDHPNIMKLFEILED----SSSFYIVGELYTGGELFDEIIKR--KRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT------TAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDIL----KRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYSSETPTISDLPSLESAMTNIRQFQAEKKLAQAALLYMASKLTTL----DETKQLTEIFRKLDTNNDGMLDR------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3IGO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -126208 for 2182 contacts (-57.8/contact) +
2D Compatibility (PS) -31418 + (NN) -12479 + (LL) 1060
1D Compatibility (HY) -25200 + (ID) 6000
Total energy: -200245.0 ( -91.77 by residue)
QMean score : 0.489
|
|
|