Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLLSKFGSLAHLCGPGGVDHLPVKILQPAKADKESFEKAYQVGAVLGSGGFGTVYAGSRIADGLPVAVKHVVKERVTEWGSLGGATVPLEVVLLRKVGAAGGAR--GVIRLLDWFERPDGFLLVLERPEPAQDLFDFITERGALDEPLARRFFAQVLAAVRHCHSCGVVHRDIKDENLLVDLRSGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSATVWSLGVLLYDMVCGDIPFEQD------EEILRGRLLFRRRVSPECQQLIRWCLSLRPSERPSLDQIAAHPWMLGADGGVPESCDLRLCTLDPDDVASTTSSSESL |
3K5U Chain:A ((11-272)) | ---------------------------------------FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG--------VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYA-PLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG-SAGELKIADFGWSVH---------CGTLDYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW-ITANSSKPSNCQ--------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3K5U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -160834 for 1938 contacts (-83.0/contact) +
2D Compatibility (PS) -26696 + (NN) -17898 + (LL) 4328
1D Compatibility (HY) -20800 + (ID) 4250
Total energy: -226150.0 ( -116.69 by residue)
QMean score : 0.487
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