Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAASSLEQKLSRLEAKLKQENREARRRIDLNLDISPQRPRPTLQLPLANDGGSRSPSSESSPQHPTPPARPRHMLGLPSTLFTPRSMESIEIDQKLQEIMKQTGYLTIGGQRYQAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDL-DVVLKSH-DCPYIVQCFGTFITNTDVFIAMELM-GTCAEKLKKRMQGPIP--ERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDE-RGQIKLCDFGISGRLVDSKAKTRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKV-LQEEPPLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEHSFIKRYETLEVDVASWFKDVMAKTESPRTSGVLSQPHLPFFR |
| 4BF2 Chain:B ((43-296)) | -----------------------------------------------------------------------------------------------------------------------------LGKGTYGIVYAGRDLSNQVRIAIKEI-----PER--------EEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ-IVHRDIKGDNVLINTYSGVLKISDFGTSKRLA--------TGTLQYMAPEIIDK---GPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESM--SAEAKAFILKCFEPDPDKRACANDLLVDEFLKV------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4BF2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -118941 for 1829 contacts (-65.0/contact) +
2D Compatibility (PS) -24522 + (NN) -20236 + (LL) 9592
1D Compatibility (HY) -15200 + (ID) 4100
Total energy: -173407.0 ( -94.81 by residue)
QMean score : 0.447
|
|
|