Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQDTVLVLQDGKCFLGKSIGKKGKCIGEICFTTGITGYQHTITDPSFADQIIMFTFPHVGNVGINDKDNEGKKIFASGVIMRELSPASHPSSYVSLSDWLEKSNLVGISGVDTRALTRHLRKHGPQNGIICPLIHSNVTTVCNTCTYDDQAILVIKGLLDELKKHKPVNGIEITDRVSLNNNFKSDLNAKYKVAVVDFGIKASIVSRLIELDCAIELIKPDRGFAQKIL--SMCPDGIVLSNGPGD-PQEI---------------GKSVTPEIDVIVKSKIPILGICMGHQLLAITLGAKTIKMNVGHR-------------GSNHPVYNVS-----S--DKVEITSQNHGFVFDPSSLPNNVEVTHISMFDNSIEGIMAKDYP--VFSVQYHPEEAPGT-HDSHYLFRRFIDNIALYKVKSA |
3FIJ Chain:A ((31-244)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QRYVDAIQKVGGFPIALPIDD-PS-TAVQAISLVDGLLLTGGQDITPQLYLEEPSQEIGAYFPPRDSYEIALVRAALDAGKPIFAICRGMQLVNVALGGTLYQDISQVETKALQHLQRVDEQLGSHTIDIEPTSELAKHHPNKKLVNSLHHQFIK--KLAPSFKVTART-ADGMIEAVEGDNLPSWYLGVQWHPELMFQTDPESEQLFQALVDESKKTM---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FIJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -88540 for 1328 contacts (-66.7/contact) +
2D Compatibility (PS) -18231 + (NN) -5724 + (LL) 11212
1D Compatibility (HY) -6000 + (ID) 1800
Total energy: -109083.0 ( -82.14 by residue)
QMean score : 0.480
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