Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEIFLDSVDLNEIEELKEFIDGITTNPSLIAKSGRKDKYE----------------------GLI--------SEICSIVTGPVSVEVVA---SNHEDMVKEGLKLTKIA-------SNIVVKLPLTYEGLISCKKLWT-EHKIPANITLCFSPGQALLAAKAGACFISPFVGRLDDI---------SYDGLLLIEDICTIYSNYGFDTKILVASVRSPTHVIEAARLGANSITVPAKVLRQLLNHPLTDRGLAIFEKDWSTKQ
3CQ0 Chain:A ((24-269))
THVVADSGDFEAISKYEP--QDSTTNPSLILAASKLEKYARFIDAAVEYGRKHGKTDHEKIENAMDKILVEFGTQILKVVPGRVSTEVDARLSFDKKATVKKALHIIKLYKDAGVPKERVLIKIASTWEGIQAAREL-EVKHGIHCNMTLLFSFTQAVACAEANVTLISPFVGRIMDFYKALDYTAETDPGVLSVKKIYSYYKRHGYATEVMAASFRNLDELK--ALAGIDNMTLPLNLLEQLYESTDPIENKLNSESAKEEGV
General information:
TITO was launched using:
RESULT:
Template:
3CQ0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -138155 for 1579 contacts (-87.5/contact) +
2D Compatibility (PS) -20602 + (NN) -3848 + (LL) 740
1D Compatibility (HY) -14400 + (ID) 3250
Total energy: -179515.0 ( -113.69 by residue)
QMean score : 0.497
(partial model without unconserved sides chains):
PDB file :
Tito_3CQ0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3CQ0-query.scw
PDB file :
Tito_Scwrl_3CQ0.pdb
: