Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAIERTLSILKPDTVKNNIIGNINSYIEKSGLRIIAQKMMLLTKKQAELFYAIHKDRPFFGGLVEFMTSGPVIVQVLVGENAISKYRQIMGATDPKQADKGTIRGDFADDVNE---NRVHGSDSLENAHKEIAFFFAECELV
2DXD Chain:A ((8-145))
---ERTLVIIKPDAVVRGLIGEIISRFEKKGLKIVGMKMIWIDRELAEKHYEEHREKPFFKALIDYITKTPVVVMVLEGRYAVEVVRKMAGATDPKDAAPGTIRGDFGLEVSDAICNVIHASDSKESAEREISLFFKPEELF
General information:
TITO was launched using:
RESULT:
Template:
2DXD.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -60897 for 1022 contacts (-59.6/contact) +
2D Compatibility (PS) -14494 + (NN) -3234 + (LL) 556
1D Compatibility (HY) -12400 + (ID) 3250
Total energy: -93719.0 ( -91.70 by residue)
QMean score : 0.425
(partial model without unconserved sides chains):
PDB file :
Tito_2DXD.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DXD-query.scw
PDB file :
Tito_Scwrl_2DXD.pdb
: