Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDGLSLIQQFRD-FVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMSRSTET-IQSRFTNGPLTIDFDAKSVLVNEQSVHLTPNEFQLLTILCHHVGKVLTYQVLLKSLYGYVNHTEMAALRVHMASLRKKLNYTQDPNTEKKLIITHPRIGYQMQHLE
1YS7 Chain:A ((8-232))
--PRVLVVDDDSDVLASLERGLRLSGFEVATAVDGAEALRSATENRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFVLAELVARVKALLRRRGSTATSSSETITVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLSRAQLLELVWGYDFA-DTNVVDVFIGYLRRKLE--AG----PRLLHTVRGVGFVLRM--
General information:
TITO was launched using:
RESULT:
Template:
1YS7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -166099 for 1817 contacts (-91.4/contact) +
2D Compatibility (PS) -23955 + (NN) -13337 + (LL) 684
1D Compatibility (HY) -16000 + (ID) 3850
Total energy: -222557.0 ( -122.49 by residue)
QMean score : 0.595
(partial model without unconserved sides chains):
PDB file :
Tito_1YS7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1YS7-query.scw
PDB file :
Tito_Scwrl_1YS7.pdb
: