Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAELKLEHIKKTYDNNNTVVKDFNLHITDKEFIVFVGPSGCGKSTTLRMVAGLESITSGDFYIDGERMNDVEPKNRDIAMVFQNYALYPH-----MTVFENMAFGLKLRKVNKKEIEQKVNEAAEILGL--TEYLGRKPKALSGGQRQRVALGRAIVRDAKVFLMDEPLSNLDAKLRVQMRTEILKLHKRLNTTTIYVTHDQTEALTMASRIVVLKDGDIMQVGTPREIYDAPNCIFVAQFIGSPAMNMLNATVEMDGLKVGTHHFKLHNKKFEKLKAAGYLDKEIILGIRAEDIHEEPIFIQTSPETQFESEVVVSELLGSEIMVHSTFQGMELISKLDSRTQVMTNDKITLAFDMNKCHFFDEKTGNRIV |
4HLU Chain:A ((25-226)) | -------------------LENVSLVINEGECLLVAGNTGSGKSTLLQIVAGLIEPTSGDVLYDGERKKGYEIR-RNIGIAFQ----YPEDQFFAERVFDEVAFAVKNFYPDRDPVPL-VKKAMEFVGLDFDSFKDRVPFFLSGGEKRRVAIASVIVHEPDILILDEPLVGLDREGKTDL-LRIVEKWKTLGKTVILISHDIETVINHVDRVVVLEKGKKVFDGTRME------------------------------------------------------------------------------------------------------------------------------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4HLU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -92434 for 1507 contacts (-61.3/contact) +
2D Compatibility (PS) -21576 + (NN) -8918 + (LL) 12740
1D Compatibility (HY) -16000 + (ID) 3550
Total energy: -129738.0 ( -86.09 by residue)
QMean score : 0.509
|
|
|