Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKSNKSLAMIVVAIIIVGVLAFQFMNHTGPFKKGTNHETVQDLNGKDKVHVQRVVDGDTFIANQNGKEIKVRLIGVDTPETVKPNTPVQPFGKEASNYSKKTLTN-QDVYLEYDK-EKQDRYGRTLAYVWISKDRMYNKELVEKGLAREKY-FSPNGKYRNVFIEAQNKAKQQKLNIWSK
4RKB Chain:A ((9-135))---------------------------------------------KEPATLIKAIDGDTVKLMYKGQPMTFRLLLVDTPEF------NEKYGPEASAFTKKMTENAKKIEVEFDKGQRTDKYGRGLAYIY-ADGKMTNEALVRQGLAKVAYVYKGNNTHEQLLRKAEAQAKKEKLNIWS-


General information:
TITO was launched using:
RESULT:

Template: 4RKB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3432 for 983 contacts (-3.5/contact) +
2D Compatibility (PS) -13397 + (NN) -5186 + (LL) 3536
1D Compatibility (HY) -8000 + (ID) 2400
Total energy: -28879.0 ( -29.38 by residue)
QMean score : 0.506

(partial model without unconserved sides chains):
PDB file : Tito_4RKB.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4RKB-query.scw
PDB file : Tito_Scwrl_4RKB.pdb: