Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAQTLAQTKQISQSHTFDVSQSHHKTPDDTNSHSVIYSTQNLDLWYGENHALQNINLDIYENQITAIIGPSGCGKSTYIKTLNRMVELVPSVKTAGKILY---RDQDIFDQKYSKEQLRTNVGMVFQQPNPFPK-SIYDNITYGPKIHGIKNKKVLDEIVEKSLRGAAIWDELKDRLHTNAYS-LSGGQQQRVCIARCLAIEPEVILMDEPTSALDPISTLRVEELVQELKEK--YTIIMVTHNMQQAARVSDKTAFFLNGYVNEYDDTDKIFSNPSNKKTEDYISGRFG |
3TIF Chain:A ((19-223)) | -------------------------------------------------YALKNVNLNIKEGEFVSIMGPSGSGKSTMLNIIGCL-----DKPTEGEVYIDNIKTNDLDDDELTKIR-RDKIGFVFQQFNLIPLLTALENVEL-PLIFKYRGAMSGEERRKRALECLKMA-ELEERFANHKPNQLSGGQQQRVAIARALANNPPIILADQPTWALDSKTGEKIMQLLKKLNEEDGKTVVVVTHDI-NVARFGERIIYLKDGEV--------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TIF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -83740 for 1567 contacts (-53.4/contact) +
2D Compatibility (PS) -21666 + (NN) -8295 + (LL) 3596
1D Compatibility (HY) -12400 + (ID) 3550
Total energy: -126055.0 ( -80.44 by residue)
QMean score : 0.531
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