Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MERTFLMIKPDAVQRNLIGEVISRIERKGLKLVGGKLMQVPMELAETHYGEHQGKPFYNDLISFITSAPVFAMVVEGEDAVNVSRHIIGSTNPSEASPGSIRGDLGLTVGRNIIHGSDSLESAEREINLWFNENEITSYASPRDAWLYE
2HVE Chain:C ((4-152))
CERTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVGLKFMQASEDLLKEHYVDLKDRPFFAGLVKYMHSGPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHGGDSVESAEKEIGLWFHPEELVDYTSCAQNWIYE
General information:
TITO was launched using:
RESULT:
Template:
2HVE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -73922 for 1096 contacts (-67.4/contact) +
2D Compatibility (PS) -16095 + (NN) -6470 + (LL) 0
1D Compatibility (HY) -17200 + (ID) 3800
Total energy: -117487.0 ( -107.20 by residue)
QMean score : 0.535
(partial model without unconserved sides chains):
PDB file :
Tito_2HVE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HVE-query.scw
PDB file :
Tito_Scwrl_2HVE.pdb
: