Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFKDFFNRTKKKKYLTVQDSKNNDVPAGIMTKCPKCKKIMYTKELAENLNVCFNCDHHIALTAYKRIEAISDEGSFTEFDKGMTSANPLDFPSYLEKIEKDQQKTGLKEAVVTGTAQLDGMKFGVAVMDSRF--------------RMGSMGSVIGEKICRIIDYCTENRLPFILFSASGGARM---QEGIISLMQMGKTSVSLKRHSDAGLLYISYLTHPTTGGVSASFAS-----VGDINLSEPKALIGFAGRRVIEQTIN-EKLP-----------------------DDFQTAEFLLEHGQLDKVVHRNDMRQTLSEILKIHQEVTK |
1PIX Chain:A ((307-564)) | ---------------------------------------------DDLYSMVPL-NDKRAYDIYNVIARLFDNSELHEYKKG------------------------YGPEMVTGLAKVNGLLVGVVANVQGLLMNYPEYKAAGSVGIGGKLYRQGLVKMNEFVTLCARDRLPIVWIQDTTGIDVGNDAEKAELLGLGQSLIYS---IQTSHIPQFEITLRKGTAAAHYVLGGPQGNDTNAFSIGTAATEIAVMNGETAATAMYSRRLAKDRKAGKDLQPTIDKMNNLIQAFYTKSRPKVCAELGLVDEIVDMNKIRGYVEAFTEAAYQNPE |
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General information:
TITO was launched using:
| RESULT:
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Template: 1PIX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -104042 for 1698 contacts (-61.3/contact) +
2D Compatibility (PS) -22902 + (NN) -5928 + (LL) 4424
1D Compatibility (HY) -9600 + (ID) 1650
Total energy: -139698.0 ( -82.27 by residue)
QMean score : 0.420
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