Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFKDFFNRTKKKKYLTVQDSKNNDVPAGIMTKCPKCKKIMYTKELAENLNVCFNCDHHIALTAYKRIEAISDEGSFTEFDKGMTSANPLDFPSYLEKIEKDQQKTGLKEAVVTGTAQLDGMKFGVAVMDSRF--------------RMGSMGSVIGEKICRIIDYCTENRLPFILFSASGGARM---QEGIISLMQMGKTSVSLKRHSDAGLLYISYLTHPTTGGVSASFAS-----VGDINLSEPKALIGFAGRRVIEQTIN-EKLP-----------------------DDFQTAEFLLEHGQLDKVVHRNDMRQTLSEILKIHQEVTK
1PIX Chain:A ((307-564))---------------------------------------------DDLYSMVPL-NDKRAYDIYNVIARLFDNSELHEYKKG------------------------YGPEMVTGLAKVNGLLVGVVANVQGLLMNYPEYKAAGSVGIGGKLYRQGLVKMNEFVTLCARDRLPIVWIQDTTGIDVGNDAEKAELLGLGQSLIYS---IQTSHIPQFEITLRKGTAAAHYVLGGPQGNDTNAFSIGTAATEIAVMNGETAATAMYSRRLAKDRKAGKDLQPTIDKMNNLIQAFYTKSRPKVCAELGLVDEIVDMNKIRGYVEAFTEAAYQNPE


General information:
TITO was launched using:
RESULT:

Template: 1PIX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -104042 for 1698 contacts (-61.3/contact) +
2D Compatibility (PS) -22902 + (NN) -5928 + (LL) 4424
1D Compatibility (HY) -9600 + (ID) 1650
Total energy: -139698.0 ( -82.27 by residue)
QMean score : 0.420

(partial model without unconserved sides chains):
PDB file : Tito_1PIX.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1PIX-query.scw
PDB file : Tito_Scwrl_1PIX.pdb: