Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTYNIVALPGDGIGPEILNGSLSLLEIISNKYNFNYQIEHHEFGGASIDTFG--EPLTEKTLNACKRADAILLGAIGGPKWTDPNNRPEQGLLKLRKSLNLFANIRPTTVVKGASSLSPLKEERVEGTDLVIVRELTSGIYFGEPRHFNNHEALDSLTY-TREEIERIVHVAFKLA-ASRRGKLTSVDKENVLA-SSKLWRKVVNEVSQLYPEVTVNHLLVDACSMHLITNPKQFDVIVCENLFGDILSDEASVIPGSLGLSPSASFSNDGPRLYEPIHGSAPDIAGKNVANPFGMILSLAMCLRESLNQPDAADELEQHIYNMIEHGQT-TADLGG---KLNTTDIFEILSQKLNH |
| 2D1C Chain:A ((22-356)) | ----ITVIPGDGIGPECVEATLKVLE--AAKAPLAYEVRE---AGASVFRRGIASGVPQETIESIRKTRVVL----KGPLETPVGYGEKSANVTLRKLFETYANVRP--VREFPNVPTPYAGR---GIDLVVVRENVEDLYAG-IEHMQTPSVAQTLKLISWKGSEKIVRFAFELARAEGRKKVHCATKSNIMKLAEGTLKRAFEQVAQEYPDIEAVHIIVDNAAHQLVKRPEQFEVIVTTNMNGDILSDLTSGLIGGLGFAPSANIGNE-VAIFEAVHGSAPKYAGKNVINPTAVLLSAVMMLR-YLEEFATADLIENALLYTLEEGRVLTGDVVGYDRGAKTTEYTEAIIQNLG- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2D1C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -122851 for 2880 contacts (-42.7/contact) +
2D Compatibility (PS) -35108 + (NN) -15595 + (LL) 1892
1D Compatibility (HY) -21600 + (ID) 5800
Total energy: -199062.0 ( -69.12 by residue)
QMean score : 0.443
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