Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPNLENLDWKNLGFSYIKTDFRFIATYKNGSWSQGELVSENALQLSEGSPVLHYGQACFEGLKAYRSQKGKALLFRPLENAKRLQTSCERLLMP-KVSEELFLKACAEVIKANQKWLAPYKSGASLYLRPFVI-GVGDNLGVKPASEYLFIVFCAPVGAYFKGGIEKGGARFITTAFDR-AAPKGTGGVKVGGNYAASLLAHKIATEQGYDDCIYLDPTTHTKIEEVGAANFFGITHDDAFITPHSPSILPSVTRKSLMVLAKEHLKLKVEEREILIDELGAFKEAGACGTAAIITPIKEIAHNNKSYSFEAPGNITKQLYDLLLSIQQGEQEAPKDWIFEVG- |
| 1A3G Chain:A ((4-308)) | --------------------------KADYIWFNGEMVRWEDAKVHVMSHALHYGTSVFEGIRCYDSHKGP-VVFRHREHMQRLHDSAKIYRFPVSQSIDELMEACRDVIRKNNL--------TSAYIRPLIFVGDVGMGVNPPAG-YSTDVIIAAFPW--------QGIDAMVSSWNRAAPNTIPTAAKAGGNYLSSLLVGSEARRHGYQEGIALDV--NGYISEGAGENLFEVKDGVLFTPPFTSSALPGITRDAIIKLAKEL-GIEVREQVLSRESLYLADEVFMSGTAAEITPVRSV--DGIQVGEGRCGPVTKRIQQAFFGLFTGETEDKWGWLDQVNQ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1A3G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -111191 for 2395 contacts (-46.4/contact) +
2D Compatibility (PS) -31360 + (NN) -16273 + (LL) 2960
1D Compatibility (HY) -12400 + (ID) 4500
Total energy: -172764.0 ( -72.14 by residue)
QMean score : 0.451
|
|
|