Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTYLNNDFEDLMKNRRSIREYDETVKISQEEMKAILEDAVTAPSSVNMQPWRFVVVESDAGKEKLSSLVRFNTRQNESSSAMILVFGDLQNFENGEKIYGESVERGLMPAEVKEQQMAKLSQYFASIPRSEAERVVLIDGGIVAMQLMLVARAHGYDTNPIGGF--ERTEVAEAFNMDPERYVPVMIVSIGKAKNSGYQSYRLPITDVTTFA
1ZCH Chain:A ((1-184))
----MNEVIKSLTDHRSIRSYT-DEPVAQEQLDQIIEAVQSAPSSINGQQVTVITVQDKERKKKISE-LAGGQPWIDQAPVFLLFCADFNRAKIALEDLH-----D---------F---KMEITN---GLESVLVGAVDAGIALGTATAAAESLGLGTVPIGAVRGNPQELIELLELP-KYVFPLSGLVIGHPADRSAKKPRLPQEAVNHQ-
General information:
TITO was launched using:
RESULT:
Template:
1ZCH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -67362 for 1358 contacts (-49.6/contact) +
2D Compatibility (PS) -20163 + (NN) -12575 + (LL) 2708
1D Compatibility (HY) -6000 + (ID) 2100
Total energy: -105492.0 ( -77.68 by residue)
QMean score : 0.513
(partial model without unconserved sides chains):
PDB file :
Tito_1ZCH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ZCH-query.scw
PDB file :
Tito_Scwrl_1ZCH.pdb
: