Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKNLESVEQ-FNAIKSEGKSVFMFSADWCGDCKFIEPVMPEIEAENEDFSFYHVDRDEFIDLCADLAIFGIPSFLAFEDGEEVGRFVSKDRKTKEEINDFLAAI
1R26 Chain:A ((3-101))
-VDVYSVEQFRNIMSEDILTVAWFTAVWCGPCKTIERPMEKIAYEFPTVKFAKVDADNNSEIVSKCRVLQLPTFIIARSGKMLGHVIGA-N--PGMLRQKLRD-
General information:
TITO was launched using:
RESULT:
Template:
1R26.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -49933 for 681 contacts (-73.3/contact) +
2D Compatibility (PS) -10445 + (NN) -3368 + (LL) 452
1D Compatibility (HY) -7600 + (ID) 1350
Total energy: -72244.0 ( -106.09 by residue)
QMean score : 0.617
(partial model without unconserved sides chains):
PDB file :
Tito_1R26.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1R26-query.scw
PDB file :
Tito_Scwrl_1R26.pdb
: