Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNIAIFASGSGSNFQALVDDEFIK---PYVKLLVCDKPNAYVLERANKHDIPVFLFEAKNYPDKEAFETEILLELRRLEIDLLVLAGYMRLIGPTLLAEFPEQIVNLHPSLLPEFKGKDAIGQAIQANVSGTGVTAHFVDAGMDTGPIIDQVKVTIETAETTDTLAEKIHQVEHIFYPKVIRGLIQNGGND
3P9X Chain:A ((3-191))
KRVAIFASGSGTNAEAIIQSQKAGQLPCEVALLITDKPGAKVVERVKVHEIPVCALDPKTYPSKEAYEIEVVQQLKEKQIDFVVLAGYMRLVGPTLLGAYEGRIVNIHPSLLPAFPGLHAIEQAIRANVKVTGVTIHYVDEGMDTGPIIAQEAVSIEEEDTLETLTTKIQAVEHRLYPATLHKLLSKAE--
General information:
TITO was launched using:
RESULT:
Template:
3P9X.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -150144 for 1417 contacts (-106.0/contact) +
2D Compatibility (PS) -20458 + (NN) -13280 + (LL) -156
1D Compatibility (HY) -17600 + (ID) 4850
Total energy: -206488.0 ( -145.72 by residue)
QMean score : 0.567
(partial model without unconserved sides chains):
PDB file :
Tito_3P9X.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3P9X-query.scw
PDB file :
Tito_Scwrl_3P9X.pdb
: