Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSEQVRVLVVDDEDRIRRLLKMYLERENYR-IEEASDGDQALSMALNNNYEVILLDLMMPGKDGIEVCRELR---EFKSTPVVMLTAKGEEANRVQGFEVGADDYIVKPFSPREVVLRVKAVLRRAKQSSEESAGGTPGDIITFPHLKIDNEAHRVIVDGKEIGLTPKEYDLLYYLAKSPDKVFDRESLLKEVWRYEFFGDLRTIDTHVKRLREKLHDVSEDAARMIVTVWGLGYKFEVPED
3FFX Chain:A ((3-112))
--KELKFLVVDDESTMRRIVRNLLKELGFNNVEEAEDGVDALNKLQAGGYGFVISDWRMPNMDGLELLKTIRADGAMSALPVLMVTAHAKKENIIAAAQAGASGYVVKPFTA----------------------------------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3FFX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -54455 for 804 contacts (-67.7/contact) +
2D Compatibility (PS) -12144 + (NN) -11948 + (LL) 9644
1D Compatibility (HY) -10400 + (ID) 1850
Total energy: -81153.0 ( -100.94 by residue)
QMean score : 0.596
(partial model without unconserved sides chains):
PDB file :
Tito_3FFX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FFX-query.scw
PDB file :
Tito_Scwrl_3FFX.pdb
: