Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNLFKTIGIIGGGQLGQMMAIAAIYMGHKVITLDPASDCSASRVSEV-IVAPYDDVEALGQLAARCDVLTYEFENVDADGLDAVVS-AGQL-PQGTDLLRISQNRIFEKDFLANKAGVTVAPYKVVTSSLDLEGFDLTKTYVLKTATGGYDGHGQKVIRSAEDLPEAQQLANSAECVLEEFVDFDLEISVIVSGN-GQDVTVFPVQENIHRNNILSKTIVPARISDQLADKAKKMAVQIAKELQLSGTLCVEMFVTAD-DIIVNEIAPRPHNSGHYSIEACDFSQFDTHILGVLGQPLPPIKLHAPAVMLNVLGQHVQ------QAIDYVAENPSAHLHIYGKLEAKHNRKMGHVTVFTEDADEVEEF |
| 3AX6 Chain:A ((1-360)) | ---MKKIGIIGGGQLGKMMTLEAKKMGFYVIVLDPTPRSPAGQVADEQIVAGFFDSERIEDLVKGSDVTTYDLEHIDVQTLKKL-YNEGYKIHPSPYTLEIIQDKFVQKEFLK-KNGIPVPEYKLVKDLESDV-REFGFPVVQKARKG-----GVFIIKNEKDLENAI----KGETYLEEFVEIEKELAVMVARNEKGEIACYPVVEMY------DTVIAPARIEEKYSKIAREIATSVVEALEGVGIFGIEMFLTKQGEILVNEIAPRPHNSGHYTIEACVTSQFEQHIRAIMNLPLGSTELLIPAVMVNLLGEEGYYGKPALIGLEEALAIEGLSLHFYGKKETRPYRKMGHFTVVDRDVERALEK |
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General information:
TITO was launched using:
| RESULT:
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Template: 3AX6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -190246 for 2823 contacts (-67.4/contact) +
2D Compatibility (PS) -36648 + (NN) -16224 + (LL) 684
1D Compatibility (HY) -25600 + (ID) 6600
Total energy: -274634.0 ( -97.28 by residue)
QMean score : 0.527
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