Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTLLEKINETRDFLQAKGVTAPEFGLILGSGLGELAEEIENPIVVDYADIPNWGQSTVVGHAGKLVYGDLSGRKVLALQGRFHFYEGNTMEIVTFPVRIMRALACHSVLVTNAAGGIG--YGPGTLMLIKDHINV---IGTNPLIGENLEEFGPRFPDMSDAYTATYRQKA----HQIAEKQNIKLEEGVYLGVSGPTYETPAEIRAFQTMGAQAVGMSTVPEVIVAAHSGLKVLGISAITN-FAAGFQS--ELNHEEVVEVTQRIKEDFKGLVKSLVAEL |
| 3GB9 Chain:A ((30-304)) | ----EDYKNTAEWLLSHTKHRPQVAIICGSGLGGLTDKLTQAQIFDYGEIPNFPRSTVPGHAGRLVFGFLNGRACVMMQGRFHMYEGYPLWKVTFPVRVFHLLGVDTLVVTNAAGGLNPKFEVGDIMLIRDHINLPGFSGQNPLRGPNDERFGDRFPAMSDAYDRTMRQRALSTWKQMGEQR--ELQEGTYVMVAGPSFQTVAECRVLQKLGADAVGMSTVPEVIVARHCGLRVFGFSLITDKVIMDYESLEKANHEEVLAAGKQAAQKLEQFVSILMASI |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GB9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -144088 for 2120 contacts (-68.0/contact) +
2D Compatibility (PS) -27490 + (NN) -5219 + (LL) 736
1D Compatibility (HY) -28000 + (ID) 6300
Total energy: -210361.0 ( -99.23 by residue)
QMean score : 0.488
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