Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIDRKDTNRFKLVSKYSPSGDQPQAIETLVDNIEGGEKAQILKGATGTGKTYTMSQVIAQVNK----PTLVIAHNKTLAGQLYGEFKEFF--PDNAVEYFVSYYDYYQPEAYVPSSDTYIEKDSSVNDEIDKLRHSATSSLLERNDVIVVASVSCIYGLGSPKEYADSVVSLRPGQEIS--RDQLLNNLVDIQFERNDIDFQRGKFRVRGDV-VEVFPASRDEHAFRIEFFGDEIDRIREIESLTGRVLGEVEHLAIFPATHFMTNDEHMEEAISKIQAEMENQVELFEKEGKLIEAQRIRQRTEYDIEMLREMGYTNGVENYSRHMDGRSEGEPPFTLLDFFPEDFLIMIDESHMTMGQIKGMYNGDRSRKEMLVNYGFRLPSALDNRPLRREEFESHVHQIVYVSATPGDYEMEQTDTVVEQIIRPTGLLDPEVEVRPSMGQMDDLLGEINLRTEKGERTFITTLTKRMAEDLTDYLKEMGVKVKYMHSD-IKTLERTEIIRDLRLGVFDVLIGINLLREGIDVPEVSLVAILDADKEGFLRNERGLIQTIGRAARNSNGHVIMYADKITDSMQRAMDETARRRRLQMDYNEKHGIVPQTIKKEIRDLIAITKSNDSDKPEKVVDYSSLSKKERQAEIKALQQQMQEAAELLDFELAAQIRDVILELKAID |
| 1WP9 Chain:A ((1-486)) | --------MVLRRDLIQPRIYQEVIYAKCKE------TNCLIVLPTGLGKTLIAMMIAEYRLTKYGGKVLMLAPTKPLVLQHAESFRRLFNLPPEKIVALTGEKSPEERSKAWARAKVIVATPQTIENDLLAGRIS-----LEDVSLIVFDEAHRAVGNYAYVFIAREYKRQAKNPLVIGLTASPGSTPEKIMEVINNLGIEHIEYRSENSPDVRPYVKGIRFEWVRVDLPEIYKEVRKLLREMLRDALKPLAETGLLESSSPDIPKKEVLRAGQIINEEMAKG---NHDLRGLLLYHAMALKLHHAIELLETQGLSALRAYIKKLYEEAKAG-------------------------------------------------STKASKEIFSDKRMKKAISLLVQAKEIGLDH--------------------------PKMDKLKEIIREQ-LQRKQNSKIIVFTNYRETAKKIVNELVKDGIKAKRFVGQASKQREQKLILDEFARGEFNVLVATSVGEEGLDVPEVDLVVFYEP-----VPSAIRSIQRRGRTGRHMPGRVIILMAKGTRDEAYYWSSR------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1WP9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -111285 for 3763 contacts (-29.6/contact) +
2D Compatibility (PS) -50081 + (NN) 626 + (LL) 14684
1D Compatibility (HY) -13200 + (ID) 3850
Total energy: -163106.0 ( -43.34 by residue)
QMean score : 0.318
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