Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAQHTIDQTQVIHTKPSALSYKEKTLVMGILNVTPDSFSDGGKYDSLDKALLHAKEMIDDGAHIIDIGGESTRPGAECVSEDEEMSRVIPVIERITKELGVPI-----SVDTYKASVADEAVKAGASI---INDIWGAKHDPKMASVAAEHNVPIVLMHNRPERNYNDLLP-----DMLSDLMESVK-IAVEAGVDEKNIILDPGIGFAKTYHDNLAVM-NKLEIFSGLGYPVLLATSRK-RFIGRVLD--LPPEERAEGTGATVCLGIQK-GCDIVRVHDVKQIARMAKMMDAMLNKGGVHHG |
| 4PZV Chain:A ((170-421)) | ------------------------TIRMGIVNLS----SDGNFDDNQRK--LNLDELIQSGAEIIDIGAESTK----PISIEEEFNKLDEFLEYFKSQLANLIYKPLVSIDTRKLEVMQKILAKHHDIIWMINDVECNNIEQK-AQLIAKYNKKYVIIHNLGITDRNQYLDKENAIDNVCDYIEQKKQILLKHGIAQQNIYFDIGFGFGKKSDTARYLLENIIEIKRRLELKALVGHSRKPSVLGLAKDSNLATLDRA---TRELSRKLEKLDIDIIRVHKI---------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PZV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -74737 for 1665 contacts (-44.9/contact) +
2D Compatibility (PS) -24864 + (NN) -14304 + (LL) 3992
1D Compatibility (HY) -16400 + (ID) 3950
Total energy: -130263.0 ( -78.24 by residue)
QMean score : 0.420
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