Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKTPFERLALYDINASIKEGSYVAVIGHTGSGKSTLLQHLNGLLKPTKGQISLGSTVI----------QAGKKNKDLKKLRKKVGIVFQFPEHQLFEE-TVLKDISFGPMN-FGVKKEDAEQKAREMLQLVGLSEELLDRSPFELSGGQMRRVAIAGVLAMDPEVLVLDEPTAGLDPRGRKEIMDMFYELHQRGNLTTILVTHSMEDAAAYADEMIVMHKGTIQASGSPRDLFLKGEEMAGWGLDLPETIKFQRHLEAALGVRFNEPMLTIEDAAAEIRALFQGEKTL |
1B0U Chain:A ((45-241)) | --------------------------------KSTFLRCINFLEKPSEGAIIVNGQNINLVRDKDGQLKVADKNQ-LRLLRTRLTMVFQ--HFNLWSHMTVLENVMEAPIQVLGLSKHDARERALKYLAKVGIDERAQGKYPVHLSGGQQQRVSIARALAMEPDVLLFDEPTSALDPELVGEVLRIMQQLAEEGK-TMVVVTHEMGFARHVSSHVIFLHQGKIEEEGDPEQVF------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1B0U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -78831 for 1349 contacts (-58.4/contact) +
2D Compatibility (PS) -20955 + (NN) -16228 + (LL) 6492
1D Compatibility (HY) -17600 + (ID) 3600
Total energy: -130722.0 ( -96.90 by residue)
QMean score : 0.553
|
|
|