Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKSRGLVRFFFSILAVGALITSIVGFA-L-KWGEYRGLFLTFEAGQIFSVLFW--F-IGVG---MIFSVISQMGFFVFLTVHRFALEILRSSSLWNLLQLFFILF---VAFDLMYVRFLFFGESGESLAGYAWLPVFLLIFGVITAYIKQKQSSKKTFVSSLFLMVVITALEWFPALRVNDEDWLYLMLFPLMACNAFQLLMLPKFAAK
2OVS Chain:A ((1-118))
--------------------GLVPRGSMIMKDGIYSIIFISNEDSCGEGILIKNGNMITGGDIASVYQGVLSEDEDIILHVHRYNYEI---PSVLNIEQDYQLVIPKKVLSNDNNLTLHCHVRGNEKLFVDVYAKFIEPLV--------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2OVS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -121045 for 706 contacts (-171.5/contact) +
2D Compatibility (PS) -11306 + (NN) 3772 + (LL) 9208
1D Compatibility (HY) -4000 + (ID) 1050
Total energy: -124421.0 ( -176.23 by residue)
QMean score : 0.026
(partial model without unconserved sides chains):
PDB file :
Tito_2OVS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OVS-query.scw
PDB file :
Tito_Scwrl_2OVS.pdb
: