Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGKPVVAIVGRPNVGKSTIFNRIAGERISIVEDTPGVTRDRIYSSAEWLNYDFNLIDTGGIDIGDEPFLAQIRQQAEIAMDEADVIIFMVNGREGVTAADEEVAKILYRTKKPVVLAVNKLDNTEMRANIYDFYSLGFGEPYPISGTHGLGLGDLLDAVAEHFKNIPETKYNEEVIQFCLIGRPNVGKSSLVNAMLGEERVIVSNVAGTTRDAVDTSFTYNQQEFVIVDTAGMRKKGKVYETTEKYSVLRALKAIDRSEVVAVVLDGEEGIIEQDKRIAGYAHEAGKAVVIVVNKWDAVDKDESTMKEFEENIRDHFQFLDYAPILFMSALTKKRIHTLMPAIIKASENHSLRVQTNVLNDVIMDAVAMNPTPTHNGSRLKIYYATQVSVKPPSFVVFVNDPELMHFSYERFLENRIRDAFGFEGTPIKIFARARK
1XZP Chain:A ((240-405))---------------------------------------------------------------------------------------------------------------------------------------------------------------------------LNRGLRMVIVGKPNVGKSTLLNRLLNEDRAIVTDIPGTTRDVISEEIVIRGILFRIVDTAGVRSETN--DLVERLGIERTLQEIEKADIVLFVLDASSPLDEEDRKILERIK--NKRYLVVINKVDVVEKIN--EEEIKNKL------GTDRHMVKISALKGEGLEKLEESIYRETQE---------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1XZP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 750 -101687 -135.58 -612.57
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : -135.58
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.458

(partial model without unconserved sides chains):
PDB file : Tito_1XZP.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1XZP-query.scw
PDB file : Tito_Scwrl_1XZP.pdb: