Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKGMFFCARAVVPFMKKSKDGAIVNVGSIAGITGAGSSMPYAVSKSAVHGLTKSLAHALAPEIRVSGVAPGAVAT---RWWAGRE--------EKMKSMIG-SLLLQCIAEPDDVAKLICSLIEQES--LTGQIITIDSGQTL
2DTX Chain:A ((108-248))--GYYYASKFAIPYMIRSRDPSIVNISSVQASIITKNASAYVTSKHAVIGLTKSIALDYAPLLRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQEVASAVAFLASREASFITGTCLYVDGGLSI


General information:
TITO was launched using:
RESULT:

Template: 2DTX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 403 -30817 -76.47 -242.65
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain A : 0.76

3D Compatibility (PKB) : -76.47
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.387

(partial model without unconserved sides chains):
PDB file : Tito_2DTX.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2DTX-query.scw
PDB file : Tito_Scwrl_2DTX.pdb: