Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSASEFSRAELAAAFEKFEKTVARAAATRDWDCWVQHYTPDVEYIEHAAGIMRGRQRVRAWIQETMTTFPGSHMVAFPSLWSVIDESTGRIICELDNPMLD-------PGDGSVISATNISIITYAGNGQWCRQEDIYNPLRFLRAAMKWCRKAQELGTLDEDAARWMRRHGGP
2GEY Chain:A ((2-148))
------SMAERKALCLEMVAA----WNRWDLSGIIKHWSPDIVHYSED--NEVSSADMVKLMEGGLKAFPD---LQLEVKSIMAEED--RVALRITVTATHQGEFMGVQPTGQRVSWHLVEELRFV-DGKVVEHWDVINMRPLLVRLGKLPDVPKVVLEASAKLA---------
General information:
TITO was launched using:
RESULT:
Template:
2GEY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -39191 for 898 contacts (-43.6/contact) +
2D Compatibility (PS) -15905 + (NN) -10856 + (LL) 1240
1D Compatibility (HY) -5600 + (ID) 1000
Total energy: -71312.0 ( -79.41 by residue)
QMean score : 0.330
(partial model without unconserved sides chains):
PDB file :
Tito_2GEY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2GEY-query.scw
PDB file :
Tito_Scwrl_2GEY.pdb
: