Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTVRVGINGFGRIGRNFYRALLAQQEQGTADVEVVAANDITDNSTLAHLLKFDSILGRLPCDVGLEGDDTIVVGRAKIKALAVREGPAALPWGDLGVDVVVESTGLFTNAAKAKGHLDAGAKKVIISAPATDEDITIVLGVNDDKYDGSQNIISNASCTTNCLAPLAKVLDDEFGIVKGLMTTIHAYTQDQNLQDGPHKDLRRARAAALNIVPTSTGAAKAIGLVMPQLKGKLDGYALRVPIPTGSVTDLTVDLSTRASVDEINAAFKAAAEGRLKGILKYYDAPIVSSDIVTDPHSSIFDSGLTKVI-DDQAKVVSWYDNEWGYSNRLVDLVTLVGKSL
1RM4 Chain:A ((2-331))--LKVAINGFGRIGRNFLRCWHGRKD---SPLDVVVINDTGGVKQASHLLKYDSILGTFDADVKTAGDSAISVDGKVIKVVSDRN-PVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLITAPGKGDIPTYVVGVNEEGYTHADTIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASHRDLRRARAACLNIVPTSTGAAKAVALVLPNLKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSIDFRCTDVSSTIDSSLTMVMGDDMVKVIAWYDNEWGYSQRVVDLADIV----


General information:
TITO was launched using:
RESULT:

Template: 1RM4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -178926 for 2899 contacts (-61.7/contact) +
2D Compatibility (PS) -35038 + (NN) -10705 + (LL) 128
1D Compatibility (HY) -32400 + (ID) 9150
Total energy: -266091.0 ( -91.79 by residue)
QMean score : 0.512

(partial model without unconserved sides chains):
PDB file : Tito_1RM4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1RM4-query.scw
PDB file : Tito_Scwrl_1RM4.pdb: