Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPVAHRLLFSLTALLAATAQAAVDGQKLYTQGGANPAAAACVTCHGADGMGLAAAGFPRLAGLPAAYLSKQLHDLKQG--------GSREHPVMKGIADALGDDEIQALANTLAAMPAPKPVELSRVATPRSPGETLAVRGAWERNIPECVTCHGPAGSGVGEA--FPPLQGQGEMYLSNQLRAWQLGTRRNDP-----NDLMGHIAKSLSEEEIRSVSQFFATLGQAGGQP |
1ETP Chain:A ((1-190)) | ---------------------------AGDAEAGQGKVAVCGACHGVDGNS-PAPNFPKLAGQGERYLLKQLQDIKAGSTPGAPEGVGRKVLEMTGMLDPLSDQDLEDIAAYFSSQKGSVG---YADPALAKQGEKLFRGGKLDQGMPACTGCHAPNGVGN-DLAGFPKLGGQHAAYTAKQLTDFREGNRTNDGDTMIMRGVAA-KL---SNKDIEALSSYIQGLH------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ETP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -32739 for 1378 contacts (-23.8/contact) +
2D Compatibility (PS) -18655 + (NN) -5482 + (LL) 3380
1D Compatibility (HY) -5600 + (ID) 2750
Total energy: -61846.0 ( -44.88 by residue)
QMean score : 0.282
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