Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIEADYLVIGAGIAGASTGYWLSA-HG-RVVVLEREAQPGYHSTGRSAAHYTVAYGTPQVRALTAASRAFFDNPPAGFCEHPLLSPRPEMVVDFSDDPEELRRQYESGKALVPQMRLLDAEQACSIVPVLRR------------DKVFGATYDPTGADIDTDALHQGYLRGIRRNQGQVLCNHEALEIRRVDG----------------AWEVRCDAG--SYRAAVLVNAAGAWCDAIAGLAGVRPLGLQPKRRSAFIFAPPPGIDC----------HDWPMLVSLDESFYLKPDA---GMLLGSPANAD-PV-EAHDVQPEQLDIATGM--YLIEEATTLTIRRPEHTWAGLRSFVADGDLVAGYAANAEGFFWVAAQGGYGIQTSAAMGEASAALIRHQPLPAHLREHGLDEAMLSPRRLSP |
| 3AXB Chain:A ((22-433)) | -PRFDYVVVGAGVVGLAAAYYLKVWSGGSVLVVDAGHAPGSGDSGRSMAAFRTFFSSTMNRLVAGSTVRLFEDAQRG-GEDLGLVKSGYLFVYDRERWREVEEPLREAGEEGRDYLIIPPEELERRLGMNTRVSDGEEAEVLGVGDVEGAVLIRSAGFLDAEKVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSDGTRVEVGEKLVVAAGVWSNRLLNPLGI-DTFSRPKKRMVFRVSASTEGLRRIMREGDLAGAGAPPLIILPKRVLVRPAPREGSFWVQLSDNLGRPFALEEDPQPEEHYYSLAILPILSLYLPQFQDAYPSGGWAGHYDISFDANPVVFEPW-ESGIVVAAGTSGSGIMKSDSIGRVAAAVALGMESVELYGGVEMPVKW-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3AXB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -141214 for 3179 contacts (-44.4/contact) +
2D Compatibility (PS) -37759 + (NN) 1832 + (LL) 576
1D Compatibility (HY) -13600 + (ID) 3600
Total energy: -193765.0 ( -60.95 by residue)
QMean score : 0.426
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