Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHATSSDDFSLSSRVALVTGAGRGIGRGIALALARAGADVAVADLDPQVAEETAAAIRSLGRRS-LALGVDVSDGDSVRAMVERVATEFGRLDVAVNNAGVISIRKVAELSLADWDRVMNVNARGVFLCCQAELPLMQAQRWGRIVNLSSIAGKV-GLPDLAHYCASKFAVIGFSNALAKEVARDGVTVNALCPG-IVGTGMW-RGEDGLSGRWRQAGESEAQSWERHQASLLPQGEAQTVEDMGQLVVYLAC--APHVTGQAIAVDGGFSL
3RIH Chain:D ((37-281))
--------FDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTGYPGWSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDMGEEYISGMARS----------------IPMGMLGSPVDIGHLAAFLATDEAGYITGQAIVVDGG---
General information:
TITO was launched using:
RESULT:
Template:
3RIH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -165049 for 2058 contacts (-80.2/contact) +
2D Compatibility (PS) -25674 + (NN) -7921 + (LL) 1724
1D Compatibility (HY) -15600 + (ID) 5100
Total energy: -217620.0 ( -105.74 by residue)
QMean score : 0.498
(partial model without unconserved sides chains):
PDB file :
Tito_3RIH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3RIH-query.scw
PDB file :
Tito_Scwrl_3RIH.pdb
: