Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSEQTPEQPSTAPNPALQRQRASQLAQALRTELQKALIGQGAVIDDVLTALLA--GGHVLVEGVPGLGKTLLVRALARCFD------GGFARIQFTPDLMPSDVTGHA---VYDLASEQFKLR---KGPVFTHLLLADEINRAPAKTQAALLEVMQERQVTLEGRALPVPQPFMVLATQNPIEQEGTYPLPEAELDRFMLKLRIDYPAEAEEQTLVRQVTRSARSDMLDVANLRPLLKDKDVLALQRIASDLPIDDQVLDYAVRLARTTRNWPGLALGAGPRASIALVRCGRARALLRGG-EFVVPDDIKGCALAVLRHRVRLSPELDIEGLSVDQVLQQLLDQVPAPRV |
1SXJ Chain:D ((26-264)) | -----------------------PWVEKYRPKNLDEVTAQDHAVTVLKKTLKSANLPHMLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSKPSKHDLENYPCPPYKIIILDEADSMTADAQSALRRTMETYS-----------GVTRFCLICNYVT-----RIIDPLASQCSK-FRFKALDASNAIDRLRFISEQ---------------------------ENVKCDDGVLERILDISAG-----------DLRRGITLLQSASKGAQYLGDGKNITSTQVEELAGVVP--------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1SXJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -110843 for 1734 contacts (-63.9/contact) +
2D Compatibility (PS) -23966 + (NN) -5679 + (LL) 7456
1D Compatibility (HY) -2400 + (ID) 1900
Total energy: -137332.0 ( -79.20 by residue)
QMean score : 0.413
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