Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAT---LFDPIVLGDLELPNRIVMAPLTRCRADE-GRVPNA-LMAEYYAQRADAGLILSEATAVTPMGVGYPDTPGIWSDDQVRGWSNVTKAVHAAGGRIFLQLWHVGRI-----------SDPLYLNGELPVAPSAIAAEGH-----VSLVRPKRPYVTPRALDTEEIAD-IVEAYRQGAERAK-AAGFDGVEIHGANGYLLDQFLQDSTNKRTD--RYGGSIENRARLLLEVTDAAISVWGAQRVGVHLAPRADSHDMGDSNRLETFSHVARELGKRGIAFI-CAREAQADDSIG---VALKKAFGGPYIANEQFTLDSANAILAKGDADAVAFGVPFIANPDLVERLRQGAELNPPRPETFYTGGTEGYLDYPTLA |
| 4E2B Chain:A ((4-379)) | MATFPELLRPLKLGRYTLRNRIIMAPLTRCQATEDGHVPRTESMLKYYEDRASAGLIIAEATMVQPNYTGFLTEPGIYSDAQIEEWRKIVDAVHKKGGLIFLQLIHAGRAGIPEKILQQPKSDQDPLAGRL-LAASAIPIKDHRIPAYFAASGEKETYGVPEELTDDEVRNGIIPLFVEGAKNAIFKAGFDGVEIHGANGYLLDAFFRESSNKRQSGPYAGTTIDTRCQLIYDVTKSVCDAVGSDRVGLRISPLNGVHGMIDSNPEALTKHLCKKIEPLSLAYLHYLRGDMVNQQIGDVVAWVRGSYSGVKISNLRYDFEEADQQIREGKVDAVAFGAKFIANPDLVERAQHDWPLNEPRPETYYTRTAVGYNDYPT-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4E2B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -160858 for 3040 contacts (-52.9/contact) +
2D Compatibility (PS) -37380 + (NN) -16327 + (LL) 180
1D Compatibility (HY) -26000 + (ID) 7800
Total energy: -248185.0 ( -81.64 by residue)
QMean score : 0.626
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