Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKATRLAIPDVILFEPRVFGDDRGFFFESYNQRAFEEACGHPVSFVQDNHSRSARGVLRGLHYQIRQA--QGKLVRATLGEVFDVAVDLRRGSPTFGQWVGERLSAENKRQMWIPAGFAHGFVVLSEYAEFLYKTTDFWAPEHERCIVWNDPELKIDWPLQD--APLLSEKDRQGKAFADADCFP
1EP0 Chain:A ((4-184))
FRFIKTSLDGAIIIEPEVYTDERGYFMETFNEAIFQE-NGLEVRFVQDNESMSVRGVLRGLHFQR--EKPQGKLVRVIRGEIFDVAVDLRKNSDTYGEWTGVRLSDENRREFFIPEGFAHGFLALSDECIVNYKCTELYHPEYDSGIPWDDPDIGIDWPLEMVDDLIISEKDRNWKPLRENPVY-
General information:
TITO was launched using:
RESULT:
Template:
1EP0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -83550 for 1366 contacts (-61.2/contact) +
2D Compatibility (PS) -18576 + (NN) -4864 + (LL) 224
1D Compatibility (HY) -16000 + (ID) 4350
Total energy: -127116.0 ( -93.06 by residue)
QMean score : 0.451
(partial model without unconserved sides chains):
PDB file :
Tito_1EP0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1EP0-query.scw
PDB file :
Tito_Scwrl_1EP0.pdb
: