Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | SHHWGYGKHNGPEHWHKDFP---IA-KGERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNNGHAFNVEFDDSQDKAVLKGGPLDGTYRLIQFHFHWGSLDGQGSEHTVDKKKYAAELHLVHWNTKYGDFGKAVQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTNFDPRGLLPESLDYWTYPGSLTTPPLLECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELMVDNWRPAQPLKNRQIKASFK |
1KOP Chain:A ((2-223)) | -THWGYTGHDSPESWGNLSEEFRLCSTGKNQSPVNITE---TVSGKLPAIKVNYKPSM-VDVENNGHTIQVNYPEG--GNTLTVNG--RTYTLKQFHFHV------PSENQIKGRTFPMEAHFVHLDEN-----------KQPLVLAVLYEAGKTNGRLSSIWNVMPMTA--GKVKLNQPFDASTLLPKRLKYYRFAGSLTTPPCTEGVSWLVLKTYDHIDQAQAEKFTRAVG---------S-ENNRPVQPLNARVVIE--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KOP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -95986 for 1698 contacts (-56.5/contact) +
2D Compatibility (PS) -23359 + (NN) -10764 + (LL) 984
1D Compatibility (HY) -14800 + (ID) 3700
Total energy: -147625.0 ( -86.94 by residue)
QMean score : 0.586
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