Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKQDYISYIRSKVGHETIFLTYSGGILTDGKGRVLLQLRAD---KNSWGIIGGCMELGESSVDTLKREFFEETGLRVEPIRLLNVYTNFQDSYPNGDKAQTVGFIYEVSCPKPVNIEGFHNEETLQLDYFSKEDVKNITIVN-EQHQLILDEYFSQTFQMGR
3Q93 Chain:A ((23-155))
-----------------ASRLYTLVLVLQ-PQRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLTVDALHKVGQIVFEFVG----EPELMDVHVFCTDSIQG-TPV---ESDEMRPCWFQLDQIPF--KDMWPDDSYWFPLLLQKKKFHGY
General information:
TITO was launched using:
RESULT:
Template:
3Q93.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -48949 for 927 contacts (-52.8/contact) +
2D Compatibility (PS) -13539 + (NN) -2039 + (LL) 1216
1D Compatibility (HY) -2000 + (ID) 1000
Total energy: -66311.0 ( -71.53 by residue)
QMean score : 0.594
(partial model without unconserved sides chains):
PDB file :
Tito_3Q93.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3Q93-query.scw
PDB file :
Tito_Scwrl_3Q93.pdb
: