Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRRILSILVFAIMLAGCSSNASTEKQHAGG-----EKTVKAEPQSTSSQKDSTDDYQPNSQVTDDRTLHKVGQTFSDDKGKAVLKDIKQV-NKTYKIGDVELTVKEMKLIHLRPD------YSMIDYFHELTHDEEFDFVKVFVDIKNTSTKKVNVAPIALMKTNTGETF------------DWNKDIYLEELNGELEGGAEKSGNLGFIVNASSGHAHDKAADAEKKTKEIKWIEITTSDVFDHNHKKISDAQKIKIKF-
5F18 Chain:A ((12-232))----------------PSSQARLEKEYFDQHFGPFFRTEQLIIRAPLTDKHIYQPYPSGAD-------VPFGPPLDIQILHQVLDLQIAIENITASYDNETVTLQDICLAPLSPYNTNCTILSVLNYFQN-------SHSVLDHKKGDDFFVYADYHTHFLYCVRAPASLNDTSLLHDPCLGTFGGPVFPWLVLGGYDDQNYNNATALVITFPVNNYYNDTEKLQRAQAWEKEFINFVKN----------YKNPNLTISFT


General information:
TITO was launched using:
RESULT:

Template: 5F18.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 796 -39579 -49.72 -201.93
target 2D structure prediction score : 0.44
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : -49.72
2D Compatibility (Sec. Struct. Predict.) : 0.44
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.291

(partial model without unconserved sides chains):
PDB file : Tito_5F18.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5F18-query.scw
PDB file : Tito_Scwrl_5F18.pdb: