Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDMFQKVEKIGEGTYGVVYKAKNR--ETGQLVALKKIRLDLEMEGVPSTAIREISLLKELKHPNIVRLLDVVH--NERKLYLVFEFLSQDLKKYMDST----PGSELPLHLIKSYLFQLLQGVSFCHSHRVIHRDLKPQNLLI----NELGAIKLADFGLARAFGVPLRTYTHEVVTLWYRAPEILLGSKFYTTAVDIWSIGCIFAEMVTRKALFPGDSE----IDQLFRIFRMLGTPSEDTWPGVTQLPDYKGSFPKWTR-----KGLEE----IVPNLEPEGRDLLMQLLQYDPSQRITAKTALAHPYFSSPEPSPAARQYVLQRFRH |
| 4F6U Chain:A ((27-339)) | -------CKVGRGTYGHVYKAKRKDGKDDKDYALKQIE----GTGISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASK--VQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGF--------------VVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQENPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLE----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4F6U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -153249 for 1946 contacts (-78.8/contact) +
2D Compatibility (PS) -27422 + (NN) -9807 + (LL) 3056
1D Compatibility (HY) -29200 + (ID) 5650
Total energy: -222272.0 ( -114.22 by residue)
QMean score : 0.420
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