Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRLSVLLSLLPLALGAPAVEQRSEAAPLIEARGEMVANKYIVKFKEGSALSALDAAMEKISGKPDHVYKNVFSGFAATLDENMVRVLRAHPDVEYIEQDAVVTINAAQTNAPWGLARISSTSPGTSTYYYDESAGQGSCVYVIDTGIEASHPEFEGRAQMVKTYYYS-----SRDGNGHGTHCAGTVGSR-----TYGVAK--KTQLFGVKVLDDNGSGQYSTIIAGMDFVASDKNNRNCPKGVVASLSLGGG-YSSSVNSAAARLQSSGVMVAVAAGNNNADARNYSPASEPSVCTVGASDRYDRRSSFSNYGSVLDIFGPGTSILSTWIGGSTRSISGTSMATPHVAGLAAYLMTLGKTTAASACRYIADTANKGDLSNIPFGTVNLLAYNNYQA |
| 1Y9Z Chain:A ((2-212)) | ------------------------------------------------------------------------------------------------------------ETTPWGQTFVGATVL------SD-SQAGNRTICIIDSGYDRSHNDLNANNVTGTNNSGTGNWYQPGNNNAHGTHVAGTIAAIANNEGVVGVMPNQNANIHIVKVFNEAGWGYSSSLVAAIDTCVNS------GGANVVTMSLGGSGSTTTERNALNTHYNNGVLLIAAAGNAGDSSY-SYPASYDSVMSVAAVDSNLDHAAFSQYTDQVEISGPGEAILSTVTVG---------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Y9Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -45415 for 1622 contacts (-28.0/contact) +
2D Compatibility (PS) -22147 + (NN) -14131 + (LL) 12860
1D Compatibility (HY) -6000 + (ID) 3050
Total energy: -77883.0 ( -48.02 by residue)
QMean score : 0.282
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