Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRALLARLLLCVLVVSDSKGSNELHQVPSNCDCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEIDKSKTCYEGNGHFYRGKASTDTMGRPCLPWNSATVLQQTYHAHRSDALQLGLGKHNYCRNPDNRRRPWCYVQVGLKPLVQECMVHDCADGKKPSSPPEELKFQCGQKTLRPRFKIIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLISPCWVISATHCFIDYPKKEDYIVYLGRSRLNSNTQGEMKFEVENLILHKDYSADTLAHHNDIALLKIRSKEGRCAQPSRTIQTICLPSMYNDPQFGTSCEITGFGKENSTDYLYPEQLKMTVVKLISHRECQQPHYYGSEVTTKMLCAADPQWKTDSCQGDSGGPLVCSL-QGRMTLTGIVSWGRGCALKDKPGVYTRVSHFLPWIRSHTKEENGLAL |
2OQ5 Chain:A ((1-231)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IVGGTEVEEGEWPWQASLQWDG-----SHRCGATLINATWLVSAAHCFTTYKNPARWTASFGVTI----KPSKMKRGLRRIIVHEKYKHPS--HDYDISLAELSSP----VPYTNAVHRVCLPDASYEFQPGDVMFVTGFGALKNDG-YSQNHLRQAQVTLIDATTCNEPQAYNDAITPRMLCAGSLEGKTDACQGDSGGPLVSSDARDIWYLAGIVSWGDECAKPNKPGVYTRVTALRDWITSKTG------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2OQ5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -169590 for 1967 contacts (-86.2/contact) +
2D Compatibility (PS) -24742 + (NN) -12562 + (LL) 8920
1D Compatibility (HY) -12800 + (ID) 4200
Total energy: -214974.0 ( -109.29 by residue)
QMean score : 0.391
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