Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDSKHQCVKLNDGHFMPVLGFGTYAPPEVPRSKALEVTKLAIEAGFRHIDSAHLYNNEEQVGLAIRSKIADGSVKREDIFYTSKLWSTFHRPELVRPALENSLKKAQLDYVDLYLIHSPMSLKPGEELSPTDENGKVIFDIVDLCTTWEAMEKCKDAGLAKSIGVSNFNRRQLEMILNKPGLKYKPVCNQVECHPYFNRSKLLDFCKSKDIVLVAYSALGSQRDKRWVDPNSPVLLEDPVLCALAKKHKRTPALIALRYQLQRGVVVLAKSYNEQRIRQNVQVFEFQLTAEDMKAIDGLDRNLHYFNSDSFASHPNYPYSDEY |
4GIE Chain:A ((9-278)) | MNCNYNCVTLHNSVRMPQLGLGVWRAQ--DGAETANAVRWAIEAGYRHIDTAYIYSNERGVGQGIRES----GVPREEVWVTTKVWNSDQGYEKTLAAFERSRELLGLEYIDLYLIHWPGKK--------------------KFVDTWKALEKLYEEKKVRAIGVSNFEPHHLTELFKSCK--IRPMVNQVELHPLFQQRTLREFCKQHNIAITAWSPLGSGEEA--------GILKNHVLGEIAKKHNKSPAQVVIRWDIQHGIVTIPKSTNKGRIQENFNVWDFKLTEEEMRQIDELNEDKRIG----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GIE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -158952 for 2328 contacts (-68.3/contact) +
2D Compatibility (PS) -29774 + (NN) -19482 + (LL) 1324
1D Compatibility (HY) -21600 + (ID) 5150
Total energy: -233634.0 ( -100.36 by residue)
QMean score : 0.654
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