Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDPKYQRVELNDGHFMPVLGFGTYAPPEVPRNRAVEVTKLAIEAGFRHIDSAYLYNNEEQVGLAIRSKIADGSVKREDIFYTSKLWCTFFQPQMVQPALESSLKKLQLDYVDLYLLHFPMALKPGETPLPKDENGKVIFDTVDLSATWEVMEKCKDAGLAKSIGVSNFNCRQLEMILNKPGLKYKPVCNQVECHPYLNQSKLLDFCKSKDIVLVAHSALGTQRHKLWVDPNSPVLLEDPVLCALAKKHKQTPALIALRYQLQRGVVVLAKSYNEQRIRENIQVFEFQLTSEDMKVLDGLNRNYRYVVMDFLMDHPD-YPFSDEY |
| 3H7R Chain:A ((26-320)) | -----RFFELNTGAKLPCVGLGTY-------AMVATAIEQAIKIGYRHIDCASIYGNEKEIGGVLKKLIGDGFVKREELFITSKLWSNDHLPEDVPKALEKTLQDLQIDYVDLYLIHWPASLKKESL--MPT-PEML--TKPDITSTWKAMEALYDSGKARAIGVSNFSSKKLTDLLNVAR--VTPAVNQVECHPVWQQQGLHELCKSKGVHLSGYSPLGSQS-KGEV---RLKVLQNPIVTEVAEKLGKTTAQVALRWGLQTGHSVLPKSSSGARLKENLDVFDWSIPEDLFTKFSNIPQE-KFCRATEFA-HETHGFY---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3H7R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -200199 for 2518 contacts (-79.5/contact) +
2D Compatibility (PS) -31389 + (NN) -18453 + (LL) 840
1D Compatibility (HY) -19200 + (ID) 5650
Total energy: -274051.0 ( -108.84 by residue)
QMean score : 0.443
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