Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MASHLELNNGTKMPTLGLGTWKSPPGQVTEAVKVAIDMGYRHIDCAQVYQNEKEVGVALQEKLKEQVVKRQDLFIVSKLWCTFHDQSMVKGACQKTLSDLQLDYLDLYLIHWPTGFKPGPDYFPLDASGNVIPSDTDFVDTWTAMEQLVDEGLVKAIGVSNFNPLQIERILNKPGLKYKPAVNQIECHPYLTQEKLIEYCHCKGIVVTAYSPLGSPDRPWAKPEDPSLLEDPRIKEIAAKYNKTTAQVLIRFPIQRNLVVIPKSVTPARIAENFKVFDFELSNEDMATLLSYNRNWRVCALMSCAKHKDYPFHAEV |
3H7R Chain:A ((26-308)) | --RFFELNTGAKLPCVGLGTY----AMVATAIEQAIKIGYRHIDCASIYGNEKEIGGVLKKLIGDGFVKREELFITSKLWSNDHLPEDVPKALEKTLQDLQIDYVDLYLIHWPASLKKESL--MPT-PEML--TKPDITSTWKAMEALYDSGKARAIGVSNFSSKKLTDLLNVAR--VTPAVNQVECHPVWQQQGLHELCKSKGVHLSGYSPLGSQSKGEVR---LKVLQNPIVTEVAEKLGKTTAQVALRWGLQTGHSVLPKSSSGARLKENLDVFDWSIPEDLFTKFSNIPQE-KFCR---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3H7R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -172603 for 2419 contacts (-71.4/contact) +
2D Compatibility (PS) -30499 + (NN) -16842 + (LL) 2044
1D Compatibility (HY) -26000 + (ID) 6150
Total energy: -250050.0 ( -103.37 by residue)
QMean score : 0.678
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