Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MASFSAETNSTDLLSQPWNEPPVIL----SMVILSLTFLLGLPGNGLVLWVAGLKMQRTVNTIWFLHLTLADLLCCLSLPFSLAHLALQGQWPYGRFLCKLIPSIIVLNMFASVFLLTAISLDRCLVVFKPIWCQNHRNVGMACSICGCIWVVAFVMCIPVFVYREIFTTDNHNRCGYKFGLSSSLDYPDFYGDPLENRSLENIVQPPGEMNDRLDPSSFQTNDHPWTVPTVFQPQTFQRPSADSLPRGSARLTSQNLYSNVFKPADVVSPKIPSGFPIEDHETSPLDNSDAFLSTHLKLFPSASSNSFYESELPQGFQDYYNLGQFTDDDQVPTPLVAITITRLVVGFLLPSVIMIACYSFIVFRMQRGRFAKSQSKTFRVAVVVVAVFLVCWTPYHIFGVLSLLTDPETPLGKTLMSWDHVCIALASANSCFNPFLYALLGKDFRKKARQSIQGILEAAFSEELTRSTHCPSNNVISERNSTTV |
| 4KPP Chain:A ((2-396)) | DFTKEKFQLLAISSLTLPWLISLAFNYHHPALTQTLLSGLAVVSASFLISWAAETAEMDVPRSFSLAIVALLAVLPEYAVDGYFAWKAGSVGGEYVHYA--------TANMTGANRLLIGI--GWSLVAFIAFRTLKSKEVELDDG-----------------IRLEIFFLFLATLYAFTLPLKGHIS-------PFDALVFVSLYAIYIYLSTKAEREEVEVGGVPAYLCSL------------------KTETRRLSVVVLFLFAGFTILMSVEAFSEGLLETARIAGIDEFLAVQW--------IAPLASESPELIVAIYFVRRF----RVSASMNALISSKVNQWTLLIGTIAII-YSISAFKLQSLPLDARQSEEVLLTAAQSLFAVAIL--------LDL------------------KISWKEASALFLLFIVQLLFPGVEVRYIISAIYIILSLPILFAKRKEIVESFRTVKRLISLE- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4KPP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -207929 for 3406 contacts (-61.0/contact) +
2D Compatibility (PS) -38588 + (NN) 10834 + (LL) 4780
1D Compatibility (HY) -14000 + (ID) 3350
Total energy: -248253.0 ( -72.89 by residue)
QMean score : 0.202
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