Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAAPSPSGGGGSGGGSGSGTPGPVGSPAPGHPAVSSMQGKRKALKLNFANPPFKSTARFTLNPNPTGVQNPHIERLRTHSIESSGKLKISPEQHWDFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMST-SFDKFYKYVYSVLDD---VIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEE---REFSPSFINFVNLCLTKDESKRPKYKELLKHPFILMYEERAVEVACYVCKILDQMPATPSSPMYVD |
2VWI Chain:A ((13-291)) | -------------------------------------------------------------------------------------------------NRDDYELQEVIG---TAVVQAAYC----EKVAIKRIN----------------A-MSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQI-HRDVKAGNILLGEDGSVQIADFGVSAFLA---------GTPCWMAPEVMEQV---RGYDFKADIWSFGITAIELATGAAPYHKYPPM-KVLMLTLQNDPPSLET---EMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQ------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VWI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -121726 for 1678 contacts (-72.5/contact) +
2D Compatibility (PS) -23515 + (NN) -7833 + (LL) 6240
1D Compatibility (HY) -20000 + (ID) 4100
Total energy: -170934.0 ( -101.87 by residue)
QMean score : 0.405
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