Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPHEPHEPLTPPFSALPDPAGAPSRRQSRQRPQLSSDSPSAFRASRSHSRNATRSHSHSHSPRHSLRHSPGSGSCGSSSGHRPCADILEVGMLLSKINSLAHLRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPW-MQDVLLPQETAEIHLHSLSPGPSK |
4BKZ Chain:A ((3-273)) | -----------------------------------------------------------------------------------------------------------------------KDYDELLKYYELHETIGTG--AKVKLACHILTGEMVAIKIMDKNTL-----LP---RIKTEIEALKNLRH--QHICQLYHVLETANKIFMVLEYC-PGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHSQGYAHRDLKPENLLFD-EYHKLKLIDFGLCA------------SLAYAAPELIQG----GSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKYDVPKWLSPSSILLLQQMLQVDPKKRISMKNLLNHPWIMQDYNYPVEWQSKNPFIHLDDDCV |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4BKZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -160393 for 1871 contacts (-85.7/contact) +
2D Compatibility (PS) -25748 + (NN) -16787 + (LL) 4060
1D Compatibility (HY) -24400 + (ID) 4400
Total energy: -227668.0 ( -121.68 by residue)
QMean score : 0.458
|
|
|